I
Rather than viewing natural products simply for their medicinal applications and structural complexity, Jon recognized early on that these molecules function as communication signals, defense mechanisms, and mediators of ecological relationships. He began to explore how organisms use these genetically encoded small molecules to interact with one another. Most notably, Jon began studying the ecological role of the natural products produced by microbial symbionts, including the bacterial symbionts of insect systems and marine algae. Some of this work was made possible by his longstanding collaborations with Cameron Currie (McMaster University) and Monica Tallarico Pupo (University of São Paulo), in which Jon led his second ICBG program, this one focused on investigating microbial symbionts of fungus-growing ants in Brazil. This work, along with other projects in Central America, clearly revealed that the fungus-growing ants harbor a chemically rich bacterial symbiont (Pseudonocardia sp.) that protects the ant’s cultivar from a pathogenic fungal infection. Jon’s group was responsible for the discovery of numerous antifungal agents produced by Pseudonocardia sp., including dentigerumycin [11], attinimicin [12], and selvamicin [13] and this work demonstrated that many important natural products arise not from isolated organisms but from intricate biological partnerships. As if his research interests were not diverse enough, in 2017, Jon began collaborating with Ramnik Xavier (Broad Institute) to investigate the role of natural products produced by gut bacteria associated with autoimmune diseases. In a short time, his group has identified several immunomodulatory metabolites, ranging from polysaccharides to unusual lipids [14,15,16].
At the heart of Jon’s success in research has been the many wonderful collaborators he has worked with throughout the nearly 57 years of his independent career. Jon is well known for building productive partnerships with diverse scientists across many institutions, disciplines, and borders. Aside from the ones already mentioned, Jon has formed fruitful collaborations with Richard Moore, John Faulkner, Bill Fenical, Roberto Kolter, Paul Scheuer, Christopher Walsh, Michael Fischbach, Chris Ireland, Guy Carter, and many others, which have led to many of his most influential discoveries. These collaborations often provided complementary expertise, enabling many of his group's most pivotal scientific discoveries. Beyond his remarkable research accomplishments, Jon Clardy’s election to the NAS also celebrates his exceptional record as a mentor and teacher. In the classroom, Jon has been a beloved instructor. Students particularly appreciated his dry humor and his ability to make even the most complex topics (e.g., cell signaling) clear and logical. The courses he taught at Cornell and at Harvard received top ratings. In the laboratory, Jon has trained numerous graduate students, postdoctoral fellows, and young scientists throughout his career, many of whom have gone on to lead their own research programs. He has a unique mentoring style that prioritizes the individual trainee over the needs of his research group. He valued our opinions, allowing us to pursue the scientific questions that interested us most, and thus really supported us in developing our own research ideas. Personally, we owe our successes, in part, to the way Jon cultivated young, impressionable researchers to tackle ambitious questions using interdisciplinary approaches. However, his mentorship went beyond both the classroom and the research laboratory. He is known for regularly interacting with trainees at our annual meetings, even initiating a mentoring program involving ASP fellows.
Group photo from Jon’s birthday symposium (with the legendary bun center), May 4, 2024.
For more than five decades, Jon Clardy has been a pioneer in the field of natural products chemistry, making pivotal discoveries that have significantly advanced the field, trained many young investigators, and excelled as an educator. His research discoveries have made significant and lasting contributions to the field of natural products. However, his impact extends far beyond natural products chemistry, as his findings have provided critical insights into chemical ecology, chemical biology, and medicinal and synthetic chemistry. Equally impressive is his dedication to mentoring young scientists. He has used his research laboratory and teaching duties to inspire multiple generations of scientists, who carry his passion for natural product discovery into their own research programs. It is with utmost respect that we congratulate Jon on his election to NAS!
References
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- Shin, Y-H.; Bang, S.; Xavier, R.; Clardy, J. J. Am. Chem. Soc. 2025,47, 25180–25183. DOI: 10.1021/jacs.5c08613.






